IVOA Working Draft 2007 September 3
Andrea Preite Martinez, email@example.com
Frederic V. Hessman, firstname.lastname@example.org
Frederic Hessman, Georg-August-Universität Göttingen, Germany
Andrea Preite Martinez, IASF Roma, Italy
Sebastian Derriere, CDS Strasbourg, France
Soizick Lesteven, CDS Strasbourg, France
IVOA VOcabularies are named dictionaries consisting of a set of ASCII string tokens representing astrophysical concepts, data, objects, structures, devices, and processes. The tokens of a dictionary can be used to help identify, label, classify, and/or automatically process astrophysical information within Virtual Observatory (VO) or external contexts. The dictionaries are stored in a simple XML document based on a formal schema. It is possible to use XML-style namespaces to access different dictionaries in a syntactically controlled fashion, enabling different groups to define and maintain their own specialized VOcabularies while letting the rest of the astronomical community access and use them. Several examples of VOcabularies are presented, including a dictionary for the IVOA Unified Content Descriptors (UCD).
We also present a proposed Standard Vocabulary (SV), consisting of a large number of commonly encountered astrophysical concepts that go beyond the simple data labels of UCD. The purpose of the SV is to provide an immediate and broad common vocabular basis for the VO so that other contexts need only refine or extend the existent vocabulary with tokens representing specialized concepts unique or particularly relevant to those contexts. The SV includes a small number of grammatical tokens that can be used to construct labels expressing more complex entities and relationships. By including the UCD plus SV equivalents of each token in external VOcabularies, it is possible to translate semi- or fully-automatically between them.
This is a Working Draft. The first release of this document was 2007 September 1.
This is an IVOA Working Draft for review by IVOA members and other interested parties. It is a draft document and may be updated, replaced, or obsoleted by other documents at any time. It is inappropriate to use IVOA Working Drafts as reference materials or to cite them as other than “work in progress”.
A list of current IVOA Recommendations and other technical documents can be found at http://www.ivoa.net/Documents/.
This document is based on the W3C documentation standards as adapted for the IVOA.
Astronomical information of relevance to the Virtual Observatory (hereafter "VO") is not confined to quantities easily expressed in a catalogue or a table. Fairly simple things like position on the sky, brightness in some units, times measured in some frame, redshifts, classifications or other similar quantities are easily manipulated and stored in VOTables and can now be identified using IVOA Unified Content Descriptors (hereafter "UCD"). However, astrophysical concepts and quantities consist of a wide variety of names, identifications, classifications, and associations, most of which cannot be described or labeled via UCD.
Formally, one needs an ontology - a systematic mathematical description of how the concepts are both named and connected with each other - in order to process astronomical information by computer to any depth of complexity. On the other hand, there are many uses of the VO where it would be perfectly adequate to enable computers to handle astronomical tokens that intelligent humans have standardized and for which context-specific processing can be pre-defined.
One of the best examples for the need of a simple token-based vocabulary within the VO is VOEvent, the VO standard for handling astronomical events: if someone broadcasts ("publishes") the occurrence of an event, the implication is that someone else is going to want to respond to it, but no institution is interested in all possible events, so some standardized information about what the event "is about" is necessary and in a form which insures that the parties communicate effectively. If a "burst" is announced, is it a Gamma-Ray Burst due to the collapse of a star in a distant galaxy, a solar flare, or the brightening of an accretion disk around a stellar or AGN accretion disk? If a publisher doesn‘t use the label one would have expected, how is one to guess what other equivalent labels might have been used? Thus, rather than waiting for someone to perform the Herculean task of creating a useful VO ontology for astrophysics, most of us would be very happy simply to agree on how we label certain things, independent of what those things mean to individual researchers or computer processes.
There have been many attempts to create something less than a full astrophysical ontology - call them "vocabularies" or "taxonomies" - for astronomical purposes.
The first purpose of this document is to define a VO-wide standard format for such vocabularies. While the definition of the vocabulary format does specify how such vocabularies are to be encoded (in the form of an XML document with standard properties), it does not prescribe how they are stored, published, transmitted, used or processed.
The second purpose of this document is to describe the proposed IVOA "Standard Vocabulary" (hereafter "SV"), a special VOcabulary that provides the VO with a common set of standard tokens for astronomical objects, processes, events, observations, instruments, and concepts which are likely to be needed within all VO contexts. In order to make it possible to translate between different standard vocabularies, the format of IVOA VOcabulary's includes not only the individual token strings, their definitions and aliases, but also their equivalences expressed in terms of composed tokens from other Vocabularies, e.g. UCD and SV.
Several examples of SV-compatible vocabularies that could be useful in contexts within and external to the VO are presented at the end of this document.
An IVOA-conform vocabulary is formally defined by an XML document that has the form expressed symbolically in Fig. 1 and contains the following elements (the details are defined by the XML schema listed in http://ivoa.net/xml/VOcabulary/VOcabulary-v1.0.xsd ):
the top-level XML element containing references to the defining schemata, IVOA resources, potentially other vocabularies, and the required identifier (e.g. IVORN), name, and version-number attributes;
a short description of the vocabulary (optional);
a link to an external VOcabulary (e.g. the UCD or SV VOcabularies) used to define one or more of the defining tokens, optionally including a textual description and/or a namespace prefix used in the document (the prefixes “ucd” and "sv" should be always be used for UCD and SV, respectively);
the basic unit of the vocabulary. The required attribute "token" contains the token string that constitutes the working part of the vocabulary. Each token can be described by one or more <Definition>'s.
one possible meaning of the token in this context, containing the following description, alias, and equivalence elements;
an optional short description of the <Definition>, including any optional suggested rules associated with the token (e.g. constraints on the use of sub-classifications);
one of the optional free-format aliases for the token which are to be considered equivalent with the token but may have the specialized meaning associated with this <Definition>;
one or more equivalences of the token’s <Definition>, expressed as semi-colon-separated concatenations of tokens from external Vocabularies, referenced by the prefixes listed in the <Reference> elements (see above), e.g. "ucd:phys.absorption (optional).
While there is no formal restriction on the format of the tokens (other than being XML strings), the IVOA suggests that publishers of VOcabularies stick to the UCD-like syntax used by the Standard VOcabulary as described in the next section.
If no namespace prefix is given in a <Reference>, then the external tokens found in the document without prefixes can be assumed to be from any referenced VOCabularies without an assigned prefix. In order to avoid ambiguities, VOCabularies with multiple <Reference>’s should be careful to use no more than one without a namespace prefix.
The <Description> and <Alias> elements can have the usual “lang” attribute to indicate which language is used or appropriate; the standard ISO 3166-1 country codes are to be used, e.g. “en” is English, “fr” is French.
Figure 1. Structure of the IVOA VOcabulary schema.
To illustrate the form of an IVOA VOcabulary document, here is a fake XML document defining a VO-compatible cheese vocabulary (the specialized contents have been highlighted in red):
<VOcabulary name="cheese" version="42.0"
<Description>A silly cheese vocabulary.</Description>
<Description lang=”de”>Ein lustiger Kaese-Vokabular</Description>
<Description>Something you say to get people to show their teeth.
<Entry token="blue cheese">
<Description>A cheese containing a Penicillium culture</Description>
<Description>A cheese made from goat's or sheep's milk and aged in brine. </Description>
<Alias lang=”tr”>Beyaz Peynir</Alias>
Note that the first <Entry> contains two very different definitions for "cheese", that the second one uses multiple aliases for one definition, and that the last one lists two different equivalences. The tokens in the <Equivalence>’s do not have any namespace prefixes, but this is no problem: there is only one <Reference> given, so all tokens can be assumed to be from the referenced external VOcabulary.
There are no other constraints on the form of a IVOA-conform VOcabulary. The default description text does not have to be in English if the context requires the description to be in some other language and the token or any alias does not have to be as simple or in the format required for the SV (see below): the assumption is that the individual contexts know what they are doing and will try to make things as simple and useful as is "appropriate".
The purpose of the IVOA Standard Vocabulary is two-fold:
The SV is defined in terms of VOcabulary tokens following the typical UCD syntax of period-separated words. While it would be possible - and formally much cleaner because less ontological - to define the SV in terms of words in their simplest form without any formal hierarchies, the names we use for concepts often imply ontological relationships whether we like it or not and the UCD-like syntax is simpler to define, administer, and process.
The process of defining the tokens which make up the SV must be, by definition, an on-going one: as the needs of the VO change, it will be necessary to update, extend, and trim the SV. Early versions of the prototype-SV suffered from the problem of preserving simplicity, consistency, and ease of use while not creating a heavy ontological burden. These experiences resulted in the definition of a set of general rules that have been used to define the SV and should be used to guide the form and choice of future additions to the SV as well as other VOcabularies:
(the square brackets indicate optional content) that contain only the ASCII alphabetic (a-z, A-Z) and numeric (0-9) characters and the character "-" (hyphen). The hierarchy suggested by the use of period-separated words is intended to make SV easier to define and use, but there is no formal ontological constraint implied, since even a hierarchically constructed token remains a simple token.
The prefix must be defined in a <Reference> element in the VOcabulary. The standard prefixes "sv:" for the Standard Vocabulary or "ucd:" for the UCDs expressed in their VOcabulary form should be used. Note that this looks and should be used like the namespace feature of XML but the namespace prefixes are determined only via <Reference>.
but semi-colon-concatenation of UCDs or tokens should NOT occur in the definition of the token (i.e. the "token" attribute of <Entry>). For example, "blueCheese" and "cheese.blue" are acceptable tokens but "cheese;color.blue" is not. This restriction is necessary because concatenated tokens must be parseable into the smallest semantic units. For example, does "color.blue;cheese;food.Italian" mean "color.blue;cheese” + “food.Italian” (Italian food having the color of blue cheese") or “color.blue” + “cheese;food.Italian” (Itailan blue cheese)?
The top-level categories or “root-tokens” (atoms in UCD jargon) - i.e. those consisting of a single word - define the highest level of informal taxonometric organization within the Standard Vocabulary. The main purpose for this hierarchy is not to sneak in an ontological model but to help the identification, organization, administration, and processing of the tokens.
· cosmology (having to do with the large-scale properties of the universe)
· device (having to do with astronomically relevant instruments and machines)
· galaxy (having to do with galaxies)
· method (having to do with astronomical methods, calculations, and calibrations)
· diffuse (having to do with diffuse media, e.g. ISM)
· location (adjectives expressing cosmic location)
· math (having to do with mathematical concepts)
· misc (a random collection of standard definitions of potentially wide interest which may relieve the need to create a separate external vocabulary)
· morphology (having to do with concepts which are primarily geometric rather than physical)
· named (object or concepts with commonly accepted or identifiable names)
· optics (having to do with optical surfaces or concepts)
· physics (having to do with fundamental physical concepts or processes)
· planetary (having to do with non-stellar objects within a planetary system around a stellar object)
· process (having to do with astrophysically relevant phenomena, processes, and features)
· sky (having to do with definitions or phenomena relevant to an astronomical observer)
· star (having to do with stellar objects)
· stat (having to do with statistical measures or concepts; see section 3.3 below)
· source (having to do with observable astronomical objects)
· time (having to do with time and temporal behavior)
The names and number of the root tokens are arbitrary – e.g. “optics” could be considered a part of “physics”. Thus, they have been selected for purely administrative reasons: the lengths of tokens must increase as the number of root tokens decreases, and a finite number of root-tokens makes the SV easier to manage.
The root-token "process" is a “grab-bag” of concepts that are either so complex that they are not simply expressable in terms of a few concepts (e.g. “process.accretion”) or are not immediately physical or mathematical in a fundamental sense but nevertheless represent potentially interesting or important ideas and so aren’t random enough to be stuffed into the root-token “misc”. Examples of process tokens include such concrete things as “process.mountain” (a concept needed in planetology) but also less concrete but important things like “process.rotation” (the generic concept of rotation).
In addition to the normal tokens, there are a few special SV tokens that can be used within a very primitive token grammar, as described in detail within the next section:
· AND (logical AND between adjacent tokens)
· hasElements (the following token is a subset, member, or part of the preceeding token)
· isElementOf (the preceeding token is a subset, member, or part of the following token)
· NOT (logical negation of the following token);
· OR (logical OR between adjacent tokens);
and the bracket tokens
· [ (beginning of a token group, used to separate tokens into hierarchical token entities)
· ] (end of a token group)
The concatenation of VOcabulary tokens is fully un-constrained beyond the nominal constraints of XML strings and the UCD-like semi-colon separator. With a mere list of tokens, however, only a limited class of labels and relationships can be expressed. The SV therefore supports a primitive grammar to permit the creation of more complex tokens needed for real-world applications operating on complex data and metadata relationships.
The following are a simple set of grammatical rules, guidelines, and typical use cases that should guide VO users of the SV in the definition, parsing, and interpretation of complex tokens.
implicitly means that the object is primarily a planetary nebula and only secondarily contains a star. However, this distinction obviously is often an arbitrary matter of choice and taste, so some caution is in order when interpreting composite tokens.
means that it is not clear whether the object is a star or an unresolved galaxy. The same token without “OR” should be interpreted to mean “an object consisting of a star and an adjacent galaxy”.
which means either “telescope+camera” or “telescope+spectrograph”. Note that the bracket tokens are still tokens, i.e. that they need to be separated from adjacent tokens with semi-colons.
means “a galaxy that is a member of a galaxy cluster”.
means “a galaxy that is not a member of a galaxy cluster”. Note the use of bracket tokens to insure the correct interpretation (grammar tokens apply only to adjacent tokens or token groups). Another example of the usefulness of negation is the following:
which means “a gamma-ray burst source which does not have an optical counterpart”.
means that the object may or may not be a planetary nebula, and
means that the object is a galaxy and only possibly a member of a galaxy cluster. Note that the “isElementOf” applies only to “galaxy.cluster” and not to “stat.possible”, i.e. only to the immediately following token or token group.
means "Nebula or cloud of an unknown nature".
means that the otherwise unspecified thing can at least be said to be "part of a galaxy". One could have expressed even more information by inserting a leading (and hence primary) token like
which then means “a spiral (arm) within a galaxy”. Either form is much more interpretable than that without a grammar-token:
which could either mean “a spiral in a galaxy” or “a spiral structure made up of one or more galaxies”.
Note that this label does not and is not intended to express quantities: the label above does not say how many stars and nebulae are in the galaxy no does it say that there isn’t anything else which may be contained in a galaxy.
At first, this extreme variation on the UCD syntax model may look awful, but the structure is actually very simple: the string consists of a concatenation of distinct tokens (all separated by semi-colons, i.e. trivial to parse into equal units); the bracket tokens clearly separate the string into three token-groups; the location tokens can be clearly associated with different object tokens via the bracket tokens; and an explicit ordering of the three main token-groups is not required in order to be able to understand what the string represents.
Since VOcabularies are intended to be use in their raw form only by computers, the ability to parse the tokens is primary and the syntactical beauty of the expression is secondary. In fact – as always – the difficulty in parsing a complex expression lies in the interpretation of the results, not in the formal separation into metadata units. In the last example, if one was only interested in the use of “star.brownDwarf” one could simply ignore all of the rest or some application may only be interested in the occurrence of “time.variation.eclipse” with “star.spType.#”. Only certain contexts may need to consider the fact that a “time.variation.eclipse” is only possible if there is something eclipsing and something eclipsed, i.e. two other entities necessary to understand the full meaning of the label. This is ontological information that should not be expressed by VOcabulary tokens alone. Thus, the level of relevant detail ultimately depends upon the application itself and the responsibility of the VOcabulary and SV standards is only to enable useful yet parseable expressions.
In summary, the simple rules for parsing SV token grammar are:
The SV grammatical tokens and the rules for their use are not part of the VOcabulary standard and their use implies the acceptance of these rules.
Some grammar tokens express quite explicit ontological relationships – statements like “objectX is part of objectY but not a member of objectZ” are possible – even though we have gone to great lengths to argue that the whole purpose of IVOA VOcabularies and the SV is primarily not to express ontological information. The purpose of the SV token grammar is just to enable the expression of a few very simple relationships needed to produce useful labels likely to be encountered in real-life VO contexts. The eclipsing binary and GRB examples above are very good ones: the token strings aren’t attempts at expressing what the objects really are – the job of an ontology – but just examples of complex labels conveying a maximum amount of useful label-information with a minimum number of atomic tokens (we don’t want to have to define the token “eclipseOfG3VStarByBrownDwarf”) and a minimal amount of ontological baggage. Thus, users of the SV are strongly encouraged not to over-do it by creating overly complex token strings which few of us will be willing to interpret.
The proposed IVOA Standard Vocabulary is contained in an XML document in VOcabulary format in the IVOA Semantics WG home page . The tokens were chosen based on an initial cut of the previous suggestions and sources (see Introduction and references therein), sometimes modified by the above General Rules.
For convenience, in the same WG page we provide an alphabetic index of SV tokens for the proposed vocabulary.
In order to add, modify or suppress SV tokens, the same procedure adopted to maintain the list of UCD words will be used. The procedure is described in the document Maintenance of the list of UCD words, v1.2, IVOA Recommendation 28 May 2006.
The Example Vocabularies described below can all be found in the IVOA Semantics WG home page in the form of XML files in VOcabulary format.
VOEvent defines the content and meaning of a standard information packet for representing, transmitting, publishing and archiving the discovery of a transient celestial event, with the implication that timely follow-up is being requested. The VOEvent syntax provides several possibilities for describing the astronomical content and context of an event but the current version (1.1) doesn't specify any standard for that information. The documents are supposed to be as compact as possible so that they can be transported and processed within a very short time. This means that it is undesirable for the descriptions of the events to contain too much un-preprocessed metadata: if the event is, for example, a Gamma-Ray Burst, then the consumers of the events don't want to have to parse the different possible permutations of "time.variation.burst;em.gamma;..." and just want to look for the acronym "GRB". By providing for the possibility of aliases, this common usage is not only documentable but can be translated to a different context via the SV equivalent.
The beginning of a VOcabulary for VOEvent is contained in the WG page in file VOEvent_VOcabulary.xml. Note that some definitions could have been left out or made perfectly equivalent to the IVOA/SV if the assumption that the IVOA/SV is also used: this may not always be the case.
The Astronomical Outreach Imagery Metadata (AOIM) working group has come up with a simple image taxonomy hierarchy to enable the classification of astronomical images used for outreach or educational purposes. Their work has helped us to identify concepts of interest within the greater astronomical community in a context removed from the typical journal-keyword list or application proposal. Thus, the AOIM working group taxonomy provides a good test of the usefulness of the Standard Vocabulary, since the latter doesn't replace the former but does enable us to create automatic connections between both via the translations implicit in the <Definition> element of the vocabulary.
The point of the proposed AOIM VOcabulary, contained in file AOIM_VOcabulary.xml, is not just to show that equivalents can be made between the vocabulary chosen by the AOIM working group and the proposed Standard Vocabulary (since the latter was extended to be able to cover the former) but to show that it ultimately shouldn't matter what taxonomy the AOIM ultimately chooses for their own purposes - it frankly shouldn't be the IVOA's business to determine what the solutions to the AOIM working groups problems are - since a translation between the taxonomy and the SV is possible, so that any conversions between the resources of the IVOA community at large and the products purveyed by the AOIM community are easily made. For example, if the data provided by some VO data publisher should be made available for outreach purposes by a AOIM publisher, any internal information used by the data publisher to describe the data can be translated into the corresponding outreach taxonomy token independent of whether either publisher uses the SV as it's primary internal metadata medium.
The Hands-On Universe (TM) project has maintained a public database of images for use by the general public since 199?. The images are very heterogeneous, since they are gathered from a variety of professional, semi-professional, amateur, and school observatories, so a simple taxonomy is used to facilitate the browsing by the users of the database. Thus, the HOU database is a good and simple example of how the Standard Vocabulary could be used outside of the VO.
The proposed HOU VOcabulary, in the XML file HOU_VOcabulary.xml, was very simple to construct: the HOU image data portal page lists the internal codes (in the HTML source) and the descriptions given to the users, so only the SV correspondances had to be looked up.
A list of astronomical concepts, processes and object types is provided by the editors of astronomical journals (namely: The Astrophysical Journal, Astronomy and Astrophysics, M.N.R.A.S.) to help authors of astronomical papers class their works. These astronomical keywords have been analyzed by Preite Martinez & Lesteven (2007), from which they derived a set of keywords common to the three journals ApJ, A&A and MNRAS, constituting one of the potential bases for an official VO vocabulary. This common list of astronomical keywords was translated into a VOcabulary in XML format (file AAkeys_Vocabulary.xml), using SV and UCD correspondances.
1. List of changes from version 1.00:
- added root-token “named”
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. Remote Telescope Markup Language, Version 3.1,
. Heterogeneous Telescope Network (HTN),