A proposal for vector math in ADQL

With tables containing massive amounts of vectors becoming common (e.g., the collections of low-resolution spectra within Gaia DR3 or the Digitised Byurakan Surveys), giving TAP users a toolset to do server-side work with arrays becomes highly desirable and will significantly enhance the power of ADQL to do server-side analyses. This is an attempt to provide a baseline feature set for that.

TAP servers supporting this should declare that by defining a language feature. While no IVOA specification exists for array operations, use the VECTORMATH key from GAVO's ADQL extensions standards record, like this:

<languageFeatures type="ivo://org.gavo.dc/std/exts#extra-adql-keywords">
  <feature>
    <form>VECTORMATH</form>
      <description>You can compute with vectors here. See
        https://wiki.ivoa.net/twiki/bin/view/IVOA/ADQLVectorMath
        for an overview of the functions and operators available.
      </description>
   </feature>
</languageFeatures>

Element Access

To access an element of a vector, write [element-index], where element-index is an integer-valued expression. In keeping with common SQL practices (and regrettably working against most programming languages), indexes in ADQL are 1-based (rather than 0-based). That is, the first element of an array with N elements has the index 1 and the last element has the index N.

Again in keeping with common SQL practices, accessing elements outside of that range gives NULL.

It is also possible to access to multiple elements of a vector (as a sub-array). To access, write [lower-bound:upper-bound], where lower and upper bounds are integer-valued expressions and are both included. Lower-bound must be equal or greater to 1 due to indexes in ADQL are 1-based and if upper-bound is greater to the lenght of the array not error is going to be returned.

Basic Math

  • vec1+vec2 is the component-wise sum of two vectors. Where vec1 and vec2 have unequal length, the result is padded with NaNs to the length of the longer vector.
  • vec1-vec2 is the component-wise difference of two vectors. Where vec1 and vec2 have unequal length, the result is padded with NaNs to the length of the longer vector.
  • vec1*vec2 is the component-wise product of two vectors. Where vec1 and vec2 have unequal length, the result is padded with NaNs to the length of the longer vector.
  • vec1/vec2 is the component-wise quotient of two vectors. Where vec1 and vec2 have unequal length, the result is padded with NaNs to the length of the longer vector.
  • scal*vec and vec*scal is the scalar multiplication of a vector.
  • vec/scal is the equivalent of (1/scal)*vec for a scalar. This is always floating point division, never integer division.

Vector computations

  • arr_dot(vec1,vec2) is the scalar product of two vectors. Where vec1 and vec2 have unequal length, the shorter vector is padded with NaNs to the length of the longer vector. That is, the scalar product of vectors of unequal length is NaN.

Array Aggregation

These are functions that work like SQL aggregate functions, just on the elements of arrays. These ought to return the types of the elements of the argument (real, double precision, integers).

  • arr_avg(arr) returns the arithmetic mean of arr's elements
  • arr_max(arr) returns the largest element of arr
  • arr_min(arr) returns the smallest element of arr
  • arr_sum(arr) returns the sum of arr's elements
  • arr_count(arr) returns the number of elements in the array (the “array length”, where NaN elements count). This is always an integer, regardless of the array type.

Aggregate Functions for Arrays

The following standard ADQL aggregate functions, applied to arrays, work component-wise:

  • AVG
  • MIN
  • MAX
  • SUM
When aggregates are computed over arrays of different lengths, the result undefined for now. [Options would be erroring out, extending with NaN – i.e., extended items are NaN –, or extending with NULL – i.e., extended items are ignored. Postgres chooses the third option for their MIN and MAX, and it's most straightforward in implementation, so it's also what DaCHS does. But it's not necessarily a good idea].

Array Map

arr_map(expr_over_x, arr) computes a new array by binding each element of arr to x in turn and then computing expr_over_x.

expr_over_x is an ADQL numeric_value_expression that can use column references as usual, except that the name x is reserved for the evaluation.

For instance, arr_map(power(10, x), mags) will return an array [power(10, mags[1]), power(10, mags[2]), power(10, mags[3])...].

Admittedly, the artificial "x" here is not pretty. The clean solution would be to define some sort of lambda calculus for ADQL ("first class functions"), but that's almost certainly overdoing it (although: does anyone do that in SQL?).

Perhaps it is preferable to use the array name itself, as in arr_map(power(10, mags), mags)? That would at least not clobber other names that SQL might want to use somewhere else? In implementation, at least Markus had to massage these column references on the translator level anyway. On the other hand, one might be tempted then to leave out the second argument at all, and that would require a lot more thought, first, as regards finding arrays in the expression (do we want to require translators to be able to do that?), and then what should happen if there are multiple arrays.

Other array functions

Other functions related with vectors are:

  • arr_contains(element, arr) returns 1 if the element is in the array or otherwise 0 (implemented at CEFCA).
  • arr_contains_null(element) returns 1 if the array has 1 or more elements with null value or otherwise 0 (implemented at CEFCA).

Implementation Status

The SQL part of an implementation of this in postgresql is in DaCHS //adql RD, the create_array_operator script. The functionality can be tried out at the TAP service at http://dc.g-vo.org/tap. Suitable tables (i.e., with vector-like data) include sdssdr16.main, gaia.dr2epochflux, onebigb.ssa, or dfbsspec.spectra. In this implementation, array multiple access (sub-arrays) and functions arr_contains and arr_contains_null are not implemented.

Test cases for implementors can be derived from sqlarraytest.py.

This vector proposal has been also implemented at CEFCA as a part of the CEFCA Catalogues Portal. The functionality can be tried at the TAP service of the different projects/data releases offered.

Edit | Attach | Watch | Print version | History: r13 < r12 < r11 < r10 < r9 | Backlinks | Raw View | Raw edit | More topic actions
Topic revision: r13 - 2024-11-28 - TamaraCivera
 
This site is powered by the TWiki collaboration platform Powered by Perl This site is powered by the TWiki collaboration platformCopyright © 2008-2024 by the contributing authors. All material on this collaboration platform is the property of the contributing authors.
Ideas, requests, problems regarding TWiki? Send feedback